A continuation of CS170, where we implement and analyze
many basic data structures and algorithms. We emphasize
object-oriented Java designs, but also consider some
lower-level issues using C.
This semester we are using a new text, Data
Structures and Algorithms in Java (4th ed.) by
Goodrich and Tamassia. Students also need a C language
reference, such as Kernighan and Pike's The C
Programming Language (2nd ed).
- Spring 2007:
- CS153: Computing for Bioinformatics
- The course introduces computer science concepts that
are relevant to bioinformatics, with a focus on problems
involving sequence data and clustering. Topics will
include Perl programming, algorithms, and web services.
(This course does not cover much biology, nor does it
survey many practical tools of bioinformatics.)
This course satisfies part II.A of the GER. There is
no prerequisite.
- CS253: Data Structures and Algorithms
- A core CS major course, we continue the study of data
structures and algorithms initiated in CS171. Topics
include hashing, balanced search trees, tries, and graph
algorithms. Prerequisites are CS171 and CS224. The main
programming language is Java.
- Fall 2006:
-
CS224: Mathematical Foundation for CS
-
CS171: Introduction to Computer Science II
- A continuation of CS170, where we implement and analyze
many basic data structures and algorithms. We emphasize
object-oriented Java designs, but also consider some
lower-level issues using C.
Our text is Sedgewick's Algorithms in Java
(Parts 1-4) (3rd ed). (also used in CS253). I also
recommend a C language reference, such as Kernighan and
Pike's The C Programming Language (2nd ed).
- Spring 2006:
-
CS190: Freshman Seminar in Bioinformatics
- A seminar discussing recent examples of
computational problem-solving in biology.
-
CS424/CS524: Theory of Computing
- This course introduces standard theoretical models of
computation and resource limits.
- Fall 2005:
-
CS224: Math Foundations for CS
- A CS majors course. Discrete math, including CS elements like
loops, circuits, and automata.
-
CS584: Algorithms
- A topical graduate course. This semester the topic is
bioinformatic algorithms.
Older course materials may still be available, contact me for details.
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Last Modified: 16 Jan 2008